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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944092.1_cds_XP_016487036.1_77816
CDS Infomation

[gene=LOC107807213] [db_xref=GeneID:107807213] [protein=rhomboid-like protein 11, chloroplastic] [protein_id=XP_016487036.1] [location=join(66061..66265,68012..68133,68463..68548,68710..68750,68848..69014,69159..69221,70093..70275)] [gbkey=CDS]
Sequence

ATGAAACAACTTCAGCATCTTCAGTATCAGCACCATCTGGGGCTCAAACAAAATGTTTAT
CTCCACAAATTATTCATGCCCATGGCGTTGCCACTATCGACAGCACTTCCATTAATTCCT
CATCCTAAACTTCCCCTTAAACTCAAAACTTCATCTATTACCCCAACCACCTCATCTCGC
CTTCTCTGCAAATTCAATGATTCCGATATGACCACACAGCTGGAAATTCTGAAGCCTGAG
GGGAAGAAGCCAGAGAAGCGTGTCAACGGGATATTCTGGATTCTACTTATTAACCTTGGA
ATATACGTAGCAGATCATGTCTTCCAGGTTCGGGCAGTAAAAGTATTATACTTGTACCAC
AATTGGCCTGCTTGGTACCAGTTTGTGACTGCAACATTCTGTCATTTTAACTGGAACCAC
CTCTCAAGCAACCTTTTCTTTCTGTATATTTTTGGAAAACTCGTTGAAGAGGAGGAAGGA
AACTTTGGATTGTGGCTTTCTTATATAGTAACTGGAGCTGGAGCTAACCTTGTCTCGTGG
CTGATTCTGCCAAGAAATGCTGTCTCTGTTGGTTCATCTGGTGCAGTGTTTGGACTCTTT
GCTATTAGTGTACTTGTGAAGATGTCTTGGGACTGGAGAAAGATTCTTGAAGTACTTGTA
TTGGGCCAGTTTGTTATAGAAAGGGTGATGGAAGCAGCCCAAGCTTCAACAGGATTAGCG
GGAGGCATTCGTGGAGGGTCTGCCCTACAAAATGTTAATCACATTGCACATCTCTCCGGC
GCCCTAATTGGTGTTGCTTTGATATGGCTGCTGAGTGGAATTTCTTCACAAGCCACTGAG
CCGGATGCGCGGAACAATAAAAAGTGA

Peptide Sequence

PEP ID

XP_016487036.1
PEP Infomation

PREDICTED: rhomboid-like protein 11, chloroplastic [Nicotiana tabacum]
Sequence

MKQLQHLQYQHHLGLKQNVYLHKLFMPMALPLSTALPLIPHPKLPLKLKTSSITPTTSSR
LLCKFNDSDMTTQLEILKPEGKKPEKRVNGIFWILLINLGIYVADHVFQVRAVKVLYLYH
NWPAWYQFVTATFCHFNWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIVTGAGANLVSW
LILPRNAVSVGSSGAVFGLFAISVLVKMSWDWRKILEVLVLGQFVIERVMEAAQASTGLA
GGIRGGSALQNVNHIAHLSGALIGVALIWLLSGISSQATEPDARNNKK

Transcript Sequence

Gene sequence data has not been registered.